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Bin Tian, PhD

Publications since 2011

Rosonina, E. Yurko, N. Li, W. Hoque, M. Tian, B. Manley, J. L. Threonine-4 of the budding yeast RNAP II CTD couples transcription with Htz1-mediated chromatin remodeling. Proc Natl Acad Sci U S A, In process, . (PMID: 25071213)

Zheng, D. Tian, B. Sizing up the poly(A) tail: insights from deep sequencing. Trends Biochem Sci, 39:255-257, . (PMID: 24751511)

Hsin, J. P. Li, W. Hoque, M. Tian, B. Manley, J. L. RNAP II CTD tyrosine 1 performs diverse functions in vertebrate cells. Elife (Cambridge), 3:e02112, . (PMID: 24842995, PMCID: PMC4042873)

Hoque, M. Li, W. Tian, B. Accurate mapping of cleavage and polyadenylation sites by 3' region extraction and deep sequencing. Methods Mol Biol, 1125:119-129, . (PMID: 24590784)

Luo, W. Ji, Z. Pan, Z. You, B. Hoque, M. Li, W. Gunderson, S. I. Tian, B. The conserved intronic cleavage and polyadenylation site of CstF-77 gene imparts control of 3' end processing activity through feedback autoregulation and by U1 snRNP. PLoS Genet, 9:e1003613, . (PMID: 23874216, PMCID: PMC3708835)

Tian, B. Manley, J. L. Alternative cleavage and polyadenylation: the long and short of it. Trends Biochem Sci, 38:312-320, . (PMID: 23632313, PMCID: PMC3800139)

Matsushima, S. Kuroda, J. Ago, T. Zhai, P. Park, J. Y. Xie, L. H. Tian, B. Sadoshima, J. Increased oxidative stress in the nucleus caused by Nox4 mediates oxidation of HDAC4 and cardiac hypertrophy. Circ Res, 112:651-663, . (PMID: 23271793, PMCID: PMC3574183)

Hoque, M. Ji, Z. Zheng, D. Luo, W. Li, W. You, B. Park, J. Y. Yehia, G. Tian, B. Analysis of alternative cleavage and polyadenylation by 3' region extraction and deep sequencing. Nat Methods, 10:133-139, . (PMID: 23241633, PMCID: PMC3560312)

Bravo, C. Kudej, R. K. Yuan, C. Yoon, S. Ge, H. Park, J. Y. Tian, B. Stanley, W. C. Vatner, S. F. Vatner, D. E. Yan, L. Metabolomic analysis of two different models of delayed preconditioning. J Mol Cell Cardiol, 55:19-26, . (PMID: 23127662)

Yan, L. Park, J. Y. Dillinger, J. G. De Lorenzo, M. S. Yuan, C. Lai, L. Wang, C. Ho, D. Tian, B. Stanley, W. C. Auwerx, J. Vatner, D. E. Vatner, S. F. Common mechanisms for calorie restriction and adenylyl cyclase type 5 knockout models of longevity. Aging Cell, 11:1110-1120, . (PMID: 23020244, PMCID: PMC3646327)

Haenni, S. Ji, Z. Hoque, M. Rust, N. Sharpe, H. Eberhard, R. Browne, C. Hengartner, M. O. Mellor, J. Tian, B. Furger, A. Analysis of C. elegans intestinal gene expression and polyadenylation by fluorescence-activated nuclei sorting and 3'-end-seq. Nucleic Acids Res, 40:6304-6318, . (PMID: 22467213, PMCID: PMC3401467)

Xie, L. H. Shanmugam, M. Park, J. Y. Zhao, Z. Wen, H. Tian, B. Periasamy, M. Babu, G. J. Ablation of sarcolipin results in atrial remodeling. Am J Physiol Cell Physiol, 302:C1762-C1771, . (PMID: 22496245, PMCID: PMC3378074)

Tian, B. Graber, J. H. Signals for pre-mRNA cleavage and polyadenylation. Wiley Interdiscip Rev RNA, 3:385-396, . (PMID: 22012871)

Zhao, X. Park, J. Ho, D. Gao, S. Yan, L. Ge, H. Iismaa, S. Lin, L. Tian, B. Vatner, D. E. Graham, R. M. Vatner, S. F. Cardiomyocyte overexpression of the alpha1A-adrenergic receptor in the rat phenocopies second but not first window preconditioning. Am J Physiol Heart Circ Physiol, 302:H1614-H1624, . (PMID: 22307672, PMCID: PMC3330800)

Freed-Pastor, W. A. Mizuno, H. Zhao, X. Langerod, A. Moon, S. H. Rodriguez-Barrueco, R. Barsotti, A. Chicas, A. Li, W. Polotskaia, A. Bissell, M. J. Osborne, T. F. Tian, B. Lowe, S. W. Silva, J. M. Borresen-Dale, A. L. Levine, A. J. Bargonetti, J. Prives, C. Mutant p53 disrupts mammary tissue architecture via the mevalonate pathway. Cell, 148:244-258, . (PMID: 22265415, PMCID: PMC3511889)

Li, W. Yeh, H. J. Shankarling, G. S. Ji, Z. Tian, B. MacDonald, C. C. The tauCstF-64 polyadenylation protein controls genome expression in testis. PLoS One, 7:e48373, . (PMID: 23110235, PMCID: PMC3482194)

Qiu, H. Lizano, P. Laure, L. Sui, X. Rashed, E. Park, J. Y. Hong, C. Gao, S. Holle, E. Morin, D. Dhar, S. K. Wagner, T. Berdeaux, A. Tian, B. Vatner, S. F. Depre, C. H11 kinase/heat shock protein 22 deletion impairs both nuclear and mitochondrial functions of STAT3 and accelerates the transition into heart failure on cardiac overload. Circulation, 124:406-415, . (PMID: 21747053, PMCID: PMC3369833)

Usui, S. Maejima, Y. Pain, J. Hong, C. Cho, J. Park, J. Y. Zablocki, D. Tian, B. Glass, D. J. Sadoshima, J. Endogenous muscle atrophy F-box mediates pressure overload-induced cardiac hypertrophy through regulation of nuclear factor-kappaB. Circ Res, 109:161-171, . (PMID: 21617130, PMCID: PMC3257317)

Parrott, A. M. Tsai, M. Batchu, P. Ryan, K. Ozer, H. L. Tian, B. Mathews, M. B. The evolution and expression of the snaR family of small non-coding RNAs. Nucleic Acids Res, 39:1485-1500, . (PMID: 20935053, PMCID: PMC3045588)

Ji, Z. Luo, W. Li, W. Hoque, M. Pan, Z. Zhao, Y. Tian, B. Transcriptional activity regulates alternative cleavage and polyadenylation. Mol Syst Biol, 7:534, . (PMID: 21952137, PMCID: PMC3202805)

Park, J. Y. Li, W. Zheng, D. Zhai, P. Zhao, Y. Matsuda, T. Vatner, S. F. Sadoshima, J. Tian, B. Comparative analysis of mRNA isoform expression in cardiac hypertrophy and development reveals multiple post-transcriptional regulatory modules. PLoS One, 6:e22391, . (PMID: 21799842, PMCID: PMC3142162)