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Gyan Bhanot, PhD

Publications since 2011

Hormoz, S. Bhanot, G. Biehl, M. Bilal, E. Meyer, P. Norel, R. Rhrissorrakrai, K. Dayarian, A. Inter-species Inference of Gene Set Enrichment in Lung Epithelial Cells from Proteomic and Large Transcriptomic Data Sets. Bioinformatics, In process, . (PMID: 25152231)

Davis, C. F. Ricketts, C. J. Wang, M. Yang, L. Cherniack, A. D. Shen, H. Buhay, C. Kang, H. Kim, S. C. Fahey, C. C. Hacker, K. E. Bhanot, G. Gordenin, D. A. Chu, A. Gunaratne, P. H. Biehl, M. Seth, S. Kaipparettu, B. A. Bristow, C. A. Donehower, L. A. Wallen, E. M. Smith, A. B. Tickoo, S. K. Tamboli, P. Reuter, V. Schmidt, L. S. Hsieh, J. J. Choueiri, T. K. Hakimi, A. A. Chin, L. Meyerson, M. Kucherlapati, R. Park, W. Y. Robertson, A. G. Laird, P. W. Henske, E. P. Kwiatkowski, D. J. Park, P. J. Morgan, M. Shuch, B. Muzny, D. Wheeler, D. A. Linehan, W. M. Gibbs, R. A. Rathmell, W. K. Creighton, C. J. The Somatic Genomic Landscape of Chromophobe Renal Cell Carcinoma. Cancer Cell, In process, . (PMID: 25155756)

Dayarian, A. Romero, R. Wang, Z. Biehl, M. Bilal, E. Hormoz, S. Meyer, P. Norel, R. Rhrissorrakrai, K. Bhanot, G. Luo, F. Tarca, A. L. Predicting protein phosphorylation from gene expression: Top methods from the IMPROVER Species Translation Challenge. Bioinformatics, In process, . (PMID: 25061067)

Biehl, M. Sadowski, P. Bhanot, G. Bilal, E. Dayarian, A. Meyer, P. Norel, R. Rhrissorrakrai, K. Zeller, M. D. Hormoz, S. Inter-species prediction of protein phosphorylation in the sbv IMPROVER species translation challenge. Bioinformatics, In process, . (PMID: 24994890)

Bhatia, A. Yadav, A. Gagneur, J. Zhu, C. Steinmetz, L. M. Bhanot, G. Sinha, H. Yeast Growth Plasticity Is Regulated by Environment Specific Multi-QTL Interactions. G3 (Bethesda), 4:769-777, . (PMID: 24474169, PMCID: PMC4025475)

Lozy, F. Cai-McRae, X. Teplova, I. Price, S. Reddy, A. Bhanot, G. Ganesan, S. Vazquez, A. Karantza, V. ERBB2 overexpression suppresses stress-induced autophagy and renders ERBB2-induced mammary tumorigenesis independent of monoallelic loss. Autophagy, 10:662-676, . (PMID: 24492513, PMCID: PMC4091153)

Wagh, K. Bhatia, A. Greenbaum, B. D. Bhanot, G. Bird to Human Transmission Biases and Vaccine Escape Mutants in H5N1 Infections. PLoS One, 9:e100754, . (PMID: 24988306, PMCID: PMC4079711)

Tomar, P. Bhatia, A. Ramdas, S. Diao, L. Bhanot, G. Sinha, H. Sporulation genes associated with sporulation efficiency in natural isolates of yeast. PLoS One, 8:e69765, . (PMID: 23874994, PMCID: PMC3714247)

Joshi, H. Bhanot, G. Borresen-Dale, A. L. Kristensen, V. Potential tumorigenic programs associated with TP53 mutation status reveal role of VEGF pathway. Br J Cancer, 107:1722-1728, . (PMID: 23079576, PMCID: PMC3493873)

Toth, M. L. Melentijevic, I. Shah, L. Bhatia, A. Lu, K. Talwar, A. Naji, H. Ibanez-Ventoso, C. Ghose, P. Jevince, A. Xue, J. Herndon, L. A. Bhanot, G. Rongo, C. Hall, D. H. Driscoll, M. Neurite Sprouting and Synapse Deterioration in the Aging Caenorhabditis elegans Nervous System. J Neurosci, 32:8778-8790, . (PMID: 22745480, PMCID: PMC3427745)

Bilal, E. Vassallo, K. Toppmeyer, D. Barnard, N. Rye, I. H. Almendro, V. Russnes, H. Borresen-Dale, A. L. Levine, A. J. Bhanot, G. Ganesan, S. Amplified Loci on Chromosomes 8 and 17 Predict Early Relapse in ER-Positive Breast Cancers. PLoS One, 7:e38575, . (PMID: 22719901, PMCID: PMC3374812)

Powell, A. A. Talasaz, A. H. Zhang, H. Coram, M. A. Reddy, A. Deng, G. Telli, M. L. Advani, R. H. Carlson, R. W. Mollick, J. A. Sheth, S. Kurian, A. W. Ford, J. M. Stockdale, F. E. Quake, S. R. Pease, R. F. Mindrinos, M. N. Bhanot, G. Dairkee, S. H. Davis, R. W. Jeffrey, S. S. Single cell profiling of circulating tumor cells: transcriptional heterogeneity and diversity from breast cancer cell lines. PLoS One, 7:e33788, . (PMID: 22586443, PMCID: PMC3346739)

Pathak, S. Rege, M. Gogtay, N. J. Aigal, U. Sharma, S. K. Valecha, N. Bhanot, G. Kshirsagar, N. A. Sharma, S. Age-dependent sex bias in clinical malarial disease in hypoendemic regions. PLoS One, 7:e35592, . (PMID: 22558172, PMCID: PMC3338423)

Miles, G. D. Seiler, M. Rodriguez, L. Rajagopal, G. Bhanot, G. Identifying microRNA/mRNA dysregulations in ovarian cancer. BMC Res Notes, 5:164, . (PMID: 22452920, PMCID: PMC3342161)

Vermeer, P. D. Bell, M. Lee, K. Vermeer, D. W. Wieking, B. G. Bilal, E. Bhanot, G. Drapkin, R. I. Ganesan, S. Klingelhutz, A. J. Hendriks, W. J. Lee, J. H. ErbB2, EphrinB1, Src kinase and PTPN13 signaling complex regulates MAP kinase signaling in human cancers. PLoS One, 7:e30447, . (PMID: 22279592, PMCID: PMC3261204)

Wagh, K. Bhatia, A. Alexe, G. Reddy, A. Ravikumar, V. Seiler, M. Boemo, M. Yao, M. Cronk, L. Naqvi, A. Ganesan, S. Levine, A. J. Bhanot, G. Lactase persistence and lipid pathway selection in the maasai. PLoS One, 7:e44751, . (PMID: 23028602, PMCID: PMC3461017)

Norton, K. A. Namazi, S. Barnard, N. Fujibayashi, M. Bhanot, G. Ganesan, S. Iyatomi, H. Ogawa, K. Shinbrot, T. Automated reconstruction algorithm for identification of 3D architectures of cribriform ductal carcinoma in situ. PLoS One, 7:e44011, . (PMID: 22970156, PMCID: PMC3435324)